STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000009317Purinergic receptor P2Y11; Belongs to the G-protein coupled receptor 1 family. (310 aa)    
Predicted Functional Partners:
Rrp15
Ribosomal RNA processing 15 homolog.
   
 
 0.965
rsl1d1
Ribosomal L1 domain containing 1.
   
   0.959
pes1
Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 
 0.942
Ddx27
DEAD (Asp-Glu-Ala-Asp) box polypeptide 27; Belongs to the DEAD box helicase family.
   
   0.939
rpf1
Ribosome production factor 1 homolog.
   
 
 0.936
LOC103482370
Uncharacterized protein.
   
 
 0.932
ddx56
DEAD (Asp-Glu-Ala-Asp) box helicase 56.
   
   0.927
rbm28
RNA binding motif protein 28.
   
   0.924
Wdr74
WD repeat domain 74.
   
 
 0.923
noc2l
NOC2-like nucleolar associated transcriptional repressor.
   
 
 0.922
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.