STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
opa1OPA1 mitochondrial dynamin like GTPase; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (1031 aa)    
Predicted Functional Partners:
pink1
PTEN induced kinase 1.
   
 0.866
gak
Cyclin G associated kinase.
   
 0.817
ENSPREP00000020277
RBR-type E3 ubiquitin transferase.
    
 0.809
oma1
OMA1 zinc metallopeptidase.
     
 0.793
VMP1
Vacuole membrane protein 1.
      
 0.636
LOC103474393
Vacuole membrane protein 1.
      
 0.636
mief2
Mitochondrial elongation factor 2.
    
 
 0.623
ENSPREP00000015831
Uncharacterized protein.
    
 
 0.622
ENSPREP00000015870
Uncharacterized protein.
    
 
 0.622
ENSPREP00000015917
EH domain-containing protein.
    
 
 0.622
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.