STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
stc1Stanniocalcin 1. (277 aa)    
Predicted Functional Partners:
pdyn
Prodynorphin.
      
 0.649
LOC103460172
Uncharacterized protein.
      
 0.574
LOC103481804
Parathyroid hormone 1 receptor b; Belongs to the G-protein coupled receptor 2 family.
      
 0.553
tnfaip6
Tumor necrosis factor, alpha-induced protein 6.
      
 0.538
pth1r
Parathyroid hormone 1 receptor a; Belongs to the G-protein coupled receptor 2 family.
      
 0.528
casr
Calcium-sensing receptor.
      
 0.473
LOC103461139
RNA binding motif protein 39b.
      
 0.424
lemd3
LEM domain containing 3.
      
 0.424
rbm39
Uncharacterized protein.
      
 0.424
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.