STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc6a4Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. (714 aa)    
Predicted Functional Partners:
htr2b
5-hydroxytryptamine (serotonin) receptor 2B, G protein-coupled.
      
 0.729
LOC103464251
Ring finger protein 38.
   
  
 0.688
htr1a
5-hydroxytryptamine (serotonin) receptor 1A a.
   
 
 0.671
HTR1B
5-hydroxytryptamine receptor 1B.
    
 
 0.666
HTR1B-2
5-hydroxytryptamine receptor 1B.
    
 
 0.666
maob
Amine oxidase.
      
 0.571
gnrh2
Gonadoliberin; Stimulates the secretion of gonadotropins. Belongs to the GnRH family.
      
 0.549
LOC103473856
Uncharacterized protein; Belongs to the synuclein family.
   
 
 0.536
slc2a2
Solute carrier family 2 member 2; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
      
 0.513
LOC103464161
Protocadherin 10a.
   
  
 0.480
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.