STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103460031Uncharacterized protein. (269 aa)    
Predicted Functional Partners:
ENSPREP00000027033
Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family.
 
 
 0.899
LOC103460694
Zgc:136872; Belongs to the peptidase C2 family.
 
 
 0.831
ENSPREP00000034079
Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family.
 
 
 0.831
ENSPREP00000008612
Zgc:136872; Belongs to the peptidase C2 family.
 
 
 0.825
cast
Uncharacterized protein.
   
 0.788
capn7
Calpain 7; Belongs to the peptidase C2 family.
   
 0.732
capn5
Calpain 5a; Belongs to the peptidase C2 family.
 
 
 0.715
LOC103476305
Calpain 5b; Belongs to the peptidase C2 family.
 
 
 0.709
capn15
Calpain 15; Belongs to the peptidase C2 family.
   
 0.692
CAPN6
Calpain 6; Belongs to the peptidase C2 family.
 
 
 0.689
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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