STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pip5k1bPhosphatidylinositol-4-phosphate 5-kinase, type I, beta a. (504 aa)    
Predicted Functional Partners:
sec61g
SEC61 translocon gamma subunit.
   
 
 0.617
LOC103462596
Talin 2a.
    
 0.580
tln2
Talin 2b.
    
 0.580
LOC103473492
Talin 1.
    
 0.580
ENSPREP00000017779
FERM domain-containing protein.
    
 0.580
tlnrd1
Talin rod domain containing 1.
    
 0.580
gpsm2
Uncharacterized protein.
    
 
 0.578
LOC103463079
Uncharacterized protein.
    
 
 0.578
rpl9
Ribosomal protein L9.
  
  
 0.443
pin1
Peptidyl-prolyl cis-trans isomerase.
    
 0.439
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.