STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pou6f2POU domain protein. (661 aa)    
Predicted Functional Partners:
snapc4
Uncharacterized protein.
    
  0.464
polr2f
Polymerase (RNA) II (DNA directed) polypeptide F.
     
 0.459
gtf2b
General transcription factor IIB.
    
 0.443
bsx
Brain-specific homeobox.
   
 0.421
snapc3
Small nuclear RNA activating complex, polypeptide 3.
   
 
  0.419
Pcf11
CID domain-containing protein.
     
 0.418
Cdk9
Cyclin-dependent kinase 9 (CDC2-related kinase).
     
 0.415
gtf2e1
General transcription factor IIE, polypeptide 1, alpha.
    
  0.414
LOC103459886
TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
     
 0.403
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.