STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bbs12Bardet-Biedl syndrome 12. (622 aa)    
Predicted Functional Partners:
bbs10
Uncharacterized protein; Belongs to the TCP-1 chaperonin family.
    
 0.859
mkks
McKusick-Kaufman syndrome.
    
 0.829
bbs7
Bardet-Biedl syndrome 7.
   
 0.773
tcp1
T-complex 1.
    
 0.739
bbs9
Bardet-Biedl syndrome 9.
    
 0.664
bbs2
Bardet-Biedl syndrome 2.
    
 0.655
cct8
Chaperonin containing TCP1, subunit 8 (theta).
    
 0.629
bbs1
Bardet-Biedl syndrome 1.
    
 0.604
bbs4
Bardet-Biedl syndrome 4.
    
 0.604
cct2
Chaperonin containing TCP1, subunit 2 (beta).
    
 0.587
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.