STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chrna7Cholinergic receptor, nicotinic, alpha 7 (neuronal). (483 aa)    
Predicted Functional Partners:
LOC103467111
Uncharacterized protein.
  
0.543
chrna2
Cholinergic receptor, nicotinic, alpha 2b (neuronal).
  
0.539
PRKAB2
Protein kinase AMP-activated non-catalytic subunit beta 2.
      
 0.528
chrna1
Cholinergic receptor, nicotinic, alpha 1 (muscle).
   
0.521
LOC103471384
Cholinergic receptor, nicotinic, beta 3b (neuronal); Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
0.478
LOC103462687
Cholinergic receptor, nicotinic, alpha 5.
  
0.476
chrna9
Cholinergic receptor, nicotinic, alpha 9.
  
0.468
LOC103459879
Uncharacterized protein.
  
0.464
LOC103464222
Cholinergic receptor, nicotinic, beta polypeptide 3a.
   
0.460
CHRNA9
Cholinergic receptor nicotinic alpha 9 subunit.
   
0.451
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.