STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103466630Peptidylprolyl isomerase. (467 aa)    
Predicted Functional Partners:
bcl2
BCL2 apoptosis regulator b.
   
 
 0.751
usp30
Ubiquitin carboxyl-terminal hydrolase.
    
 0.685
hsp90ab1
Heat shock protein 90, alpha (cytosolic), class B member 1.
   
 0.664
LOC103457917
Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1.
   
 0.664
HSP90AA1
Heat shock protein 90 alpha family class A member 1.
   
 0.664
rptor
Regulatory associated protein of MTOR, complex 1.
    
 
 0.653
tsc1
TSC complex subunit 1b.
   
 0.642
trap1
TNF receptor-associated protein 1.
   
 0.632
LOC103482153
Si:ch211-131k2.3.
   
 0.591
ENSPREP00000010558
Prostaglandin E synthase 3b (cytosolic).
   
 0.573
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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