STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VANGL1Vang-like protein. (527 aa)    
Predicted Functional Partners:
dvl2
Dishevelled segment polarity protein 2.
    
 0.970
ENSPREP00000001242
DIX domain-containing protein.
    
 0.956
ENSPREP00000020826
DIX domain-containing protein.
    
 0.956
PRICKLE1
Prickle homolog 1a.
    
 0.909
prickle2
Prickle homolog 2b.
    
 0.909
LOC103467536
Prickle homolog 2a.
    
 0.904
LOC103459444
Prickle homolog 1b.
    
 0.894
LOC103467721
Prickle homolog 3.
    
 0.893
LOC103467447
Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.
    
 0.741
fzd6
Frizzled class receptor 6; Belongs to the G-protein coupled receptor Fz/Smo family.
   
 0.684
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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