STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kctd12Potassium channel tetramerisation domain containing 12.1. (283 aa)    
Predicted Functional Partners:
LOC103479789
SRY-box transcription factor 1a.
    
 
 0.601
foxd3
Forkhead box D3.
      
 0.595
tcf7l2
Transcription factor 7 like 2.
      
 0.592
LOC103475931
SIX homeobox 7.
      
 0.592
LOC103479391
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.493
LOC103474461
Cullin 3; Belongs to the cullin family.
    
 0.493
LOC103463937
LIM domain containing preferred translocation partner in lipoma.
      
 0.479
commd1
Copper metabolism (Murr1) domain containing 1.
     
 0.435
pitx2
Homeobox protein.
      
 0.425
tfap2d
Transcription factor AP-2 delta (activating enhancer binding protein 2 delta).
   
 0.425
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.