STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000009772Calmodulin-like 4a. (117 aa)    
Predicted Functional Partners:
rab8b
Multiple EGF-like-domains 8.
   
 0.683
LOC103457001
Phospholipase.
   
  
 0.683
LOC103458417
Phospholipase.
   
  
 0.683
cask
Uncharacterized protein; Belongs to the MAGUK family.
    
 0.670
LOC103475843
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
    
 0.661
LOC103479175
RAB3A, member RAS oncogene family, b.
      
 0.651
LOC103463328
RAB3A, member RAS oncogene family, b.
      
 0.651
sncaip
Synuclein, alpha interacting protein.
    
 0.645
LOC103475777
Phospholipase.
   
  
 0.645
cald1
Uncharacterized protein.
    
 0.602
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.