STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000009784Reverse transcriptase domain-containing protein. (544 aa)    
Predicted Functional Partners:
ENSPREP00000004299
Uncharacterized protein.
 
     0.843
fancm
Uncharacterized protein.
    
 0.763
ENSPREP00000019416
Integrase catalytic domain-containing protein.
 
     0.564
ENSPREP00000002539
Integrase catalytic domain-containing protein.
 
     0.538
ENSPREP00000019532
Integrase catalytic domain-containing protein.
 
     0.509
ENSPREP00000000521
Integrase catalytic domain-containing protein.
 
     0.506
ENSPREP00000023243
Integrase catalytic domain-containing protein.
  
     0.496
ENSPREP00000011103
Integrase catalytic domain-containing protein.
 
     0.481
ENSPREP00000011313
Integrase catalytic domain-containing protein.
 
     0.474
ENSPREP00000021966
Integrase catalytic domain-containing protein.
 
     0.473
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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