STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103470511Si:dkey-32e23.4; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (673 aa)    
Predicted Functional Partners:
gak
Cyclin G associated kinase.
   
 0.979
LOC103480422
Receptor-interacting serine-threonine kinase 3; Belongs to the protein kinase superfamily.
   
 0.929
DNM1L
Dynamin 1-like; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
  
  
 
0.901
mief2
Mitochondrial elongation factor 2.
    
 
 0.740
ENSPREP00000020277
RBR-type E3 ubiquitin transferase.
    
 0.704
pink1
PTEN induced kinase 1.
   
 0.701
dnajc6
DnaJ (Hsp40) homolog, subfamily C, member 6.
   
 0.693
ENSPREP00000015831
Uncharacterized protein.
    
 
 0.674
ENSPREP00000015870
Uncharacterized protein.
    
 
 0.674
ENSPREP00000015917
EH domain-containing protein.
    
 
 0.674
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.