STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lypla1Lysophospholipase 1. (182 aa)    
Predicted Functional Partners:
chaf1b
Chromatin assembly factor 1, subunit B.
    
 
 0.697
ZNHIT6
Zinc finger HIT-type containing 6.
    
   0.682
gap43
Growth associated protein 43.
     
 0.651
abhd13
Abhydrolase domain containing 13.
     
 0.590
ABHD17B
Abhydrolase domain containing 17B.
     
 0.551
LOC103463617
Abhydrolase domain containing 17A.
     
 0.551
LOC103479270
Peptidase_S9 domain-containing protein.
     
 0.551
esd
S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde.
      
 0.526
asf1b
Anti-silencing function 1Ba histone chaperone.
    
 
 0.522
LOC103468786
Anti-silencing function 1Ba histone chaperone.
    
 
 0.522
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.