STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
emc6ER membrane protein complex subunit 6. (110 aa)    
Predicted Functional Partners:
emc2
ER membrane protein complex subunit 2.
   
 0.995
mmgt1
Membrane magnesium transporter 1.
   
 0.979
emc4
ER membrane protein complex subunit 4; Belongs to the EMC4 family.
   
 
 0.974
emc1
ER membrane protein complex subunit 1.
    
 0.974
emc8
ER membrane protein complex subunit 8.
   
 0.967
emc7
ER membrane protein complex subunit 7.
    
 
 0.953
emc10
ER membrane protein complex subunit 10.
    
 
 0.943
LOC103468075
ER membrane protein complex subunit 3; Belongs to the EMC3 family.
   
 
 0.941
LOC103465226
ER membrane protein complex subunit 3; Belongs to the EMC3 family.
   
 
 0.941
dctn4
Dynactin 4.
    
 
 0.939
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.