STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YPEL5Protein yippee-like; Belongs to the yippee family. (118 aa)    
Predicted Functional Partners:
ranbp10
RAN binding protein 10.
   
 
 0.816
rmnd5b
Required for meiotic nuclear division 5 homolog B.
    
 
 0.730
wdr26
WD repeat domain 26b.
   
 
 0.726
armc8
Armadillo repeat containing 8.
    
 0.638
ranbp9
RAN binding protein 9.
   
 
 0.620
maea
Macrophage erythroblast attacher.
   
 
 0.506
usp32
Ubiquitin specific peptidase 32; Belongs to the peptidase C19 family.
   
  
 0.476
LOC103467734
Uncharacterized protein.
    
 
 0.465
gid8
GID complex subunit 8 homolog b (S. cerevisiae).
    
 
 0.465
SPRYD3
SPRY domain containing 3.
   
 
 0.444
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.