ncan protein (Poecilia reticulata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ncan

Neurocan b. (1343 aa)

Predicted Functional Partners:

lgmn

0.705

acan

0.571

ENSPREP00000026524

0.571

ENSPREP00000018724

0.547

LOC103477609

0.547

LOC103472829

0.547

SDC3

0.542

ncam2

0.514

ncam1

0.514

LOC103478313

0.514

Your Current Organism:

Poecilia reticulata

NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy

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structured XML interaction data, according to the 'PSI-MI' data standard

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPREP00000018724	ENSPREP00000026524	ENSPREP00000018724	ENSPREP00000026524	Uncharacterized protein.	Uncharacterized protein.	0.434
ENSPREP00000018724	LOC103472829	ENSPREP00000018724	ENSPREP00000032287	Uncharacterized protein.	Uncharacterized protein.	0.892
ENSPREP00000018724	SDC3	ENSPREP00000018724	ENSPREP00000007526	Uncharacterized protein.	Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.	0.525
ENSPREP00000018724	acan	ENSPREP00000018724	ENSPREP00000008913	Uncharacterized protein.	Aggrecan b.	0.434
ENSPREP00000018724	ncan	ENSPREP00000018724	ENSPREP00000010106	Uncharacterized protein.	Neurocan b.	0.547
ENSPREP00000026524	ENSPREP00000018724	ENSPREP00000026524	ENSPREP00000018724	Uncharacterized protein.	Uncharacterized protein.	0.434
ENSPREP00000026524	LOC103472829	ENSPREP00000026524	ENSPREP00000032287	Uncharacterized protein.	Uncharacterized protein.	0.940
ENSPREP00000026524	LOC103477609	ENSPREP00000026524	ENSPREP00000027593	Uncharacterized protein.	Brevican.	0.434
ENSPREP00000026524	ncan	ENSPREP00000026524	ENSPREP00000010106	Uncharacterized protein.	Neurocan b.	0.571
LOC103472829	ENSPREP00000018724	ENSPREP00000032287	ENSPREP00000018724	Uncharacterized protein.	Uncharacterized protein.	0.892
LOC103472829	ENSPREP00000026524	ENSPREP00000032287	ENSPREP00000026524	Uncharacterized protein.	Uncharacterized protein.	0.940
LOC103472829	SDC3	ENSPREP00000032287	ENSPREP00000007526	Uncharacterized protein.	Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.	0.525
LOC103472829	acan	ENSPREP00000032287	ENSPREP00000008913	Uncharacterized protein.	Aggrecan b.	0.434
LOC103472829	ncan	ENSPREP00000032287	ENSPREP00000010106	Uncharacterized protein.	Neurocan b.	0.547
LOC103477609	ENSPREP00000026524	ENSPREP00000027593	ENSPREP00000026524	Brevican.	Uncharacterized protein.	0.434
LOC103477609	SDC3	ENSPREP00000027593	ENSPREP00000007526	Brevican.	Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.	0.525
LOC103477609	acan	ENSPREP00000027593	ENSPREP00000008913	Brevican.	Aggrecan b.	0.434
LOC103477609	ncan	ENSPREP00000027593	ENSPREP00000010106	Brevican.	Neurocan b.	0.547
LOC103478313	ncam1	ENSPREP00000020122	ENSPREP00000016214	Neural cell adhesion molecule 3.	Neural cell adhesion molecule 1b.	0.900
LOC103478313	ncam2	ENSPREP00000020122	ENSPREP00000009341	Neural cell adhesion molecule 3.	Zgc:152904.	0.900