STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pum2Pumilio RNA-binding family member 2. (986 aa)    
Predicted Functional Partners:
Pum2
Uncharacterized protein.
 
      0.899
LOC103471867
Nanos homolog 1; Belongs to the nanos family.
   
 
 0.751
NANOS1
Nanos C2HC-type zinc finger 1; Belongs to the nanos family.
   
 
 0.751
LOC103478033
Cytochrome c oxidase copper chaperone COX17.
    
 
 0.698
gak
Cyclin G associated kinase.
   
 0.697
cnot8
CCR4-NOT transcription complex, subunit 8.
    
 
 0.648
LOC103470954
CCR4-NOT transcription complex, subunit 7.
    
 
 0.648
nanos3
Nanos homolog 3; Belongs to the nanos family.
   
 
 0.630
ENSPREP00000030212
Nanos homolog 2; Belongs to the nanos family.
   
 
 0.630
edaradd
EDAR-associated death domain.
   
 
 0.598
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.