STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
elavl3ELAV-like protein; Belongs to the RRM elav family. (383 aa)    
Predicted Functional Partners:
tra2b
Transformer 2 beta homolog.
  
 0.635
rbm38
RRM domain-containing protein.
  
 
 
 0.589
LOC103467613
RNA binding motif protein 38.
  
 
 
 0.584
LOC103478593
RNA binding motif protein 24b.
  
 
 
 0.578
ENSPREP00000008610
RRM domain-containing protein.
  
 0.561
gap43
Growth associated protein 43.
   
 
 0.559
LOC103469051
RNA binding protein fox-1 homolog 3; RNA-binding protein that regulates alternative splicing events.
  
 0.556
LOC103478079
RNA binding protein fox-1 homolog; RNA-binding protein that regulates alternative splicing events.
  
 
 0.553
PABPN1L
Poly(A) binding protein nuclear 1 like, cytoplasmic.
  
  
 0.547
Neurog1
Neurogenin 1.
   
  
 0.536
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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