STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103468198Insulin-like growth factor 2 mRNA binding protein 1. (601 aa)    
Predicted Functional Partners:
LOC103476835
Pyrophosphatase (inorganic) 1b.
   
  
 0.610
igfbp7
Insulin-like growth factor binding protein 7.
      
 0.597
ZNF503
Zinc finger protein 503.
      
 0.522
LOC103476819
Zinc finger protein 503.
      
 0.522
crlf1
Cytokine receptor-like factor 1a.
      
 0.474
LOC103457646
Lin-28 homolog B (C. elegans).
   
 
 0.449
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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