STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tmem33Transmembrane protein 33. (248 aa)    
Predicted Functional Partners:
slc30a9
Solute carrier family 30 member 9.
 
 
  
 0.584
nup133
Nucleoporin 133.
    
 
 0.552
BEND4
BEN domain containing 4.
      
 0.549
sec13
SEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family.
      
 0.549
ENSPREP00000004409
Uncharacterized protein.
      
 0.544
rnf26
Ring finger protein 26.
    
 
 0.510
chordc1
Cysteine and histidine-rich domain (CHORD) containing 1b.
   
  
 0.502
ahctf1
AT hook containing transcription factor 1.
      
 0.476
TMEM43
Uncharacterized protein.
      
 0.474
zbtb2
Zinc finger and BTB domain containing 2b.
    
 
 0.463
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.