STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fermt2Fermitin family member 2. (712 aa)    
Predicted Functional Partners:
ENSPREP00000007769
Filamin binding LIM protein 1.
    
 0.787
ILK
Integrin linked kinase.
   
 0.785
ilk
Uncharacterized protein.
   
 0.715
trip6
Uncharacterized protein.
    
 0.689
LOC103463937
LIM domain containing preferred translocation partner in lipoma.
    
 0.689
prkcd
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
     
 0.651
dapk3
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
      
 0.644
itgb6
Integrin beta; Belongs to the integrin beta chain family.
   
 0.536
LOC103482508
Integrin beta.
   
 0.519
itgb5
Integrin beta; Belongs to the integrin beta chain family.
   
 0.518
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (8%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.