STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ripor1RHO family interacting cell polarization regulator 1. (1094 aa)    
Predicted Functional Partners:
fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.790
LOC103461037
RAN binding protein 2.
   
 
  0.577
LOC103480673
Serine/threonine protein kinase 26.
    
 
 0.482
GRXCR2
Glutaredoxin and cysteine rich domain containing 2.
   
 
 0.477
gle1
GLE1 RNA export mediator.
    
 0.475
rps15a
Ribosomal protein S15a; Belongs to the universal ribosomal protein uS8 family.
   
 
 0.456
arl6ip1
ADP-ribosylation factor-like 6 interacting protein 1.
   
 
 0.456
asf1b
Anti-silencing function 1Ba histone chaperone.
    
 0.427
LOC103468786
Anti-silencing function 1Ba histone chaperone.
    
 0.427
ENSPREP00000007772
Glutaredoxin and cysteine rich domain containing 1 b.
   
 
 0.419
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.