STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
wdr34WD repeat domain 34. (503 aa)    
Predicted Functional Partners:
wdr60
WD repeat domain 60.
    
0.980
dync2li1
Dynein, cytoplasmic 2, light intermediate chain 1.
    
 0.954
tctex1d2
Tctex1 domain containing 2.
    
 0.852
DYNLRB2
Dynein light chain roadblock.
   
 0.815
DYNLRB1
Dynein light chain roadblock-type 1.
   
 0.815
ENSPREP00000032211
Robl_LC7 domain-containing protein.
   
 0.815
dctn2
Dynactin 2 (p50).
    
 0.755
LOC103474153
Dynein light chain.
    
 0.727
ENSPREP00000014727
Dynein light chain.
    
 0.727
LOC103470030
Dynein light chain.
    
 0.727
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.