STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scpep1Carboxypeptidase; Belongs to the peptidase S10 family. (445 aa)    
Predicted Functional Partners:
neu1
Neuraminidase 1.
   
 0.572
ENSPREP00000009070
Uncharacterized protein.
      
 0.549
ahdc1
AT hook, DNA binding motif, containing 1.
      
 0.468
psma5
Proteasome subunit alpha type.
      
 0.440
os9
OS9 endoplasmic reticulum lectin.
   
 
 0.433
erlec1
Endoplasmic reticulum lectin 1.
   
 
 0.433
uts2r
G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.
      
 0.422
LOC103482075
G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.
      
 0.422
rasl10a
RAS-like, family 10, member A.
    
 0.417
LOC103465866
Uncharacterized protein.
      
 0.416
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.