STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
jag1Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (1217 aa)    
Predicted Functional Partners:
LOC103473440
Notch receptor 1a.
   
0.976
notch1
Notch receptor 1b.
   
0.976
LOC103468742
Notch receptor 3.
   
0.947
LOC103463625
Notch receptor 2.
   
0.946
LOC103458084
Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.
  
  
 
0.902
ENSPREP00000001690
MNNL domain-containing protein.
     
 
0.900
rbpj
Recombination signal binding protein for immunoglobulin kappa J region.
    
 0.567
LOC103469257
Recombination signal binding protein for immunoglobulin kappa J region a.
    
 0.537
acvr2b
Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.
   
 0.514
edn1
Endothelin 1.
   
  
 0.497
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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