STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gpr137cG protein-coupled receptor 137c. (450 aa)    
Predicted Functional Partners:
Tmem221
Si:ch211-125m10.6.
      
 0.549
txndc16
Thioredoxin domain containing 16.
      
 0.549
gpr157
G protein-coupled receptor 157.
      
 0.536
lrrc42
Leucine rich repeat containing 42.
      
 0.532
haus8
Uncharacterized protein.
      
 0.531
LOC103464578
Synaptonemal complex central element protein 2.
      
 0.529
ddhd1
DDHD domain containing 1a.
      
 0.524
CLSPN
Claspin.
      
 0.524
tmem185a
Transmembrane protein 185.
      
 0.489
hsf2bp
Heat shock transcription factor 2 binding protein.
      
 0.472
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.