STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLX4IPSLX4 interacting protein. (402 aa)    
Predicted Functional Partners:
slx4
SLX4 structure-specific endonuclease subunit homolog (S. cerevisiae).
    
 
 0.754
esf1
ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae).
      
 0.598
mus81
MUS81 structure-specific endonuclease subunit.
    
 
 0.574
nars1
Asparaginyl-tRNA synthetase.
    
 
 0.552
ercc1
Excision repair cross-complementation group 1.
    
 
 0.509
terf2ip
BRCT domain-containing protein.
    
 
 0.504
LOC103482091
Essential meiotic structure-specific endonuclease 1.
      
 0.472
mapre1
Microtubule-associated protein, RP/EB family, member 1b.
      
 0.469
LOC103465105
RAD54 like 2.
      
 0.469
RAD54L2
RAD54 like 2.
      
 0.469
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.