STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cilp2Cartilage intermediate layer protein 2. (1250 aa)    
Predicted Functional Partners:
LOC103479611
RAB6B, member RAS oncogene family.
      
 0.647
mrpl55
Zgc:171480.
      
 0.646
scly
Selenocysteine lyase.
      
 0.550
rfxank
Regulatory factor X-associated ankyrin-containing protein.
      
 0.549
dhcr24
24-dehydrocholesterol reductase.
      
 0.528
ADAM12
ADAM metallopeptidase domain 12.
      
 0.477
ADAM12-2
ADAM metallopeptidase domain 12.
      
 0.477
ccn4
Cellular communication network factor 4a.
   
  
 0.473
mef2b
Myocyte enhancer factor 2b.
      
 0.440
ENSPREP00000021054
Uncharacterized protein.
  
     0.436
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.