STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LPIN2Lipin 2. (864 aa)    
Predicted Functional Partners:
ctdnep1
CTD nuclear envelope phosphatase 1b.
    
 0.837
ublcp1
Ubiquitin-like domain containing CTD phosphatase 1.
    
 0.561
cnep1r1
CTD nuclear envelope phosphatase 1 regulatory subunit 1.
     
 0.559
LOC103463351
CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 3.
    
 0.547
LOC103466433
FCP1 homology domain-containing protein.
    
 0.547
CTDSP1
CTD small phosphatase 1.
    
 0.547
ctdsp2
CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2.
    
 0.547
LOC103461890
FCP1 homology domain-containing protein.
    
 0.547
ctdspl
CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like a.
    
 0.547
LOC103478861
CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like b.
    
 0.547
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.