STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103479100F-box protein 36b. (191 aa)    
Predicted Functional Partners:
skp1
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
    
 0.799
tekt3
Tektin 3.
   
  
 0.673
cfap65
Si:ch1073-349o24.2.
   
 
  0.596
ankef1
Ankyrin repeat and EF-hand domain containing 1a.
   
 
  0.596
drc3
Dynein regulatory complex subunit 3.
   
 
  0.593
LOC103464463
Coiled-coil domain containing 114.
   
    0.588
LOC103464219
Radial spoke head component 4A.
   
    0.588
dnai1
Dynein, axonemal, intermediate chain 1, paralog 2.
   
    0.588
cul1
Cullin 1b; Belongs to the cullin family.
   
 0.552
LOC103457335
Uncharacterized protein.
   
    0.520
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.