STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
armc9Armadillo repeat containing 9. (837 aa)    
Predicted Functional Partners:
ttll10
Tubulin tyrosine ligase-like family, member 10.
      
 0.549
rbm46
RNA binding motif protein 46.
      
 0.548
dph5
Diphthamide biosynthesis 5.
      
 0.540
LOC103457894
Ectonucleoside triphosphate diphosphohydrolase 5b; Belongs to the GDA1/CD39 NTPase family.
      
 0.534
drc7
Uncharacterized protein.
      
 0.528
ttl
Tubulin tyrosine ligase.
      
 0.505
kif7
Kinesin family member 7; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
  
 0.486
ENSPREP00000025708
Si:dkey-161j23.7.
     
 0.477
enosf1
Enolase superfamily member 1.
      
 0.472
dstyk
Dual serine/threonine and tyrosine protein kinase.
      
 0.459
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.