STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
vps28Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process. (210 aa)    
Predicted Functional Partners:
vps37b
Zgc:114173.
   
 0.996
vps25
Vacuolar protein sorting 25 homolog.
   
 0.990
vps36
Vacuolar protein sorting 36 homolog.
    
 0.990
mvb12a
Uncharacterized protein.
   
 0.989
LOC103466144
Zgc:123278.
   
 0.983
tsg101
Tumor susceptibility 101a.
   
 0.983
vps37a
VPS37A subunit of ESCRT-I.
   
 0.978
LOC103466155
UEV domain-containing protein.
   
 0.976
LOC103470619
Multivesicular body subunit 12Bb.
   
 0.971
mvb12b
Multivesicular body subunit 12Ba.
   
 0.971
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.