STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103461585Homeobox domain-containing protein. (225 aa)    
Predicted Functional Partners:
LOC103477587
Pre-B-cell leukemia homeobox 2.
    
 0.787
LOC103479586
Pre-B-cell leukemia homeobox 1a.
    
 0.694
pbx4
Pre-B-cell leukemia transcription factor 4.
    
 0.694
pbx3
Homeobox domain-containing protein.
    
 0.694
pbx1
Homeobox domain-containing protein.
    
 0.694
meis3
Myeloid ecotropic viral integration site 3.
   
 0.604
pknox1
Pbx/knotted 1 homeobox 1.1.
   
 0.564
pknox2
Pbx/knotted 1 homeobox 2.
   
 0.555
pgs1
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Functions in the biosynthesis of the anionic phospholipids phosphatidylglycerol and cardiolipin; Belongs to the CDP-alcohol phosphatidyltransferase class-II family.
      
 0.475
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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