cmss1 protein (Poecilia reticulata) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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[Homology]

Score

cmss1

Cms1 ribosomal small subunit homolog. (294 aa)

Predicted Functional Partners:

nop53

0.864

ltv1

0.811

bysl

0.751

utp23

0.735

nifk

0.734

ddx52

0.732

LOC103482370

0.721

nol10

0.706

esf1

0.637

rpf2

0.621

Your Current Organism:

Poecilia reticulata

NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC103482370	bysl	ENSPREP00000023230	ENSPREP00000006398	Uncharacterized protein.	Bystin-like.	0.860
LOC103482370	cmss1	ENSPREP00000023230	ENSPREP00000011175	Uncharacterized protein.	Cms1 ribosomal small subunit homolog.	0.721
LOC103482370	ddx52	ENSPREP00000023230	ENSPREP00000025008	Uncharacterized protein.	DEAD (Asp-Glu-Ala-Asp) box polypeptide 52.	0.716
LOC103482370	esf1	ENSPREP00000023230	ENSPREP00000006399	Uncharacterized protein.	ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae).	0.871
LOC103482370	ltv1	ENSPREP00000023230	ENSPREP00000031080	Uncharacterized protein.	LTV1 ribosome biogenesis factor.	0.716
LOC103482370	nifk	ENSPREP00000023230	ENSPREP00000012490	Uncharacterized protein.	Nucleolar protein interacting with the FHA domain of MKI67.	0.990
LOC103482370	nol10	ENSPREP00000023230	ENSPREP00000006422	Uncharacterized protein.	Nucleolar protein 10.	0.873
LOC103482370	nop53	ENSPREP00000023230	ENSPREP00000012860	Uncharacterized protein.	Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family.	0.929
LOC103482370	rpf2	ENSPREP00000023230	ENSPREP00000030306	Uncharacterized protein.	Ribosome production factor 2 homolog.	0.984
LOC103482370	utp23	ENSPREP00000023230	ENSPREP00000003411	Uncharacterized protein.	UTP23 small subunit processome component.	0.687
bysl	LOC103482370	ENSPREP00000006398	ENSPREP00000023230	Bystin-like.	Uncharacterized protein.	0.860
bysl	cmss1	ENSPREP00000006398	ENSPREP00000011175	Bystin-like.	Cms1 ribosomal small subunit homolog.	0.751
bysl	ddx52	ENSPREP00000006398	ENSPREP00000025008	Bystin-like.	DEAD (Asp-Glu-Ala-Asp) box polypeptide 52.	0.943
bysl	esf1	ENSPREP00000006398	ENSPREP00000006399	Bystin-like.	ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae).	0.926
bysl	ltv1	ENSPREP00000006398	ENSPREP00000031080	Bystin-like.	LTV1 ribosome biogenesis factor.	0.999
bysl	nifk	ENSPREP00000006398	ENSPREP00000012490	Bystin-like.	Nucleolar protein interacting with the FHA domain of MKI67.	0.911
bysl	nol10	ENSPREP00000006398	ENSPREP00000006422	Bystin-like.	Nucleolar protein 10.	0.998
bysl	nop53	ENSPREP00000006398	ENSPREP00000012860	Bystin-like.	Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family.	0.897
bysl	rpf2	ENSPREP00000006398	ENSPREP00000030306	Bystin-like.	Ribosome production factor 2 homolog.	0.943
bysl	utp23	ENSPREP00000006398	ENSPREP00000003411	Bystin-like.	UTP23 small subunit processome component.	0.654