STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lmtk3Si:dkey-40m6.8. (2209 aa)    
Predicted Functional Partners:
il34
Interleukin 34.
   
 0.538
LOC103481754
Uncharacterized protein.
  
    0.533
grb2
Growth factor receptor-bound protein 2b.
   
 0.524
LOC103460636
Uncharacterized protein.
  
     0.505
ENSPREP00000014222
Uncharacterized protein.
  
   0.503
Kitlg
Kit ligand a.
    
 0.490
LOC103475422
Uncharacterized protein.
  
     0.466
LOC103466031
SH3 and multiple ankyrin repeat domains 3a.
  
  0.463
LOC103479233
Uncharacterized protein.
  
 
 
 0.446
LOC103467541
Colony stimulating factor 1b (macrophage).
   
  0.438
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.