STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chrna9Cholinergic receptor, nicotinic, alpha 9. (446 aa)    
Predicted Functional Partners:
chrna1
Cholinergic receptor, nicotinic, alpha 1 (muscle).
  
0.687
chrna7
Cholinergic receptor, nicotinic, alpha 7 (neuronal).
  
0.468
LOC103464217
Uncharacterized protein.
  
0.467
LOC103471386
Uncharacterized protein.
  
0.467
LOC103472688
Si:ch211-39a7.1.
  
0.467
LOC103478178
Uncharacterized protein.
  
0.464
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.