STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
crebrfCreb3 regulatory factor. (709 aa)    
Predicted Functional Partners:
LOC103470136
cAMP responsive element binding protein 3-like 3 like.
    
 0.807
Unc79
Uncharacterized protein.
    
 0.768
creb3l3
cAMP responsive element binding protein 3-like 3a.
    
 0.750
klhl24
Kelch-like family member 24a.
   
 
 0.726
ENSPREP00000027898
cAMP responsive element binding protein-like 2.
   
 
 0.664
rnf14
RBR-type E3 ubiquitin transferase.
    
 
 0.554
LOC103461037
RAN binding protein 2.
    
 0.533
klhl6
Kelch-like family member 6.
   
 
 0.516
LOC103469212
Si:ch211-256e16.3.
   
 
 0.516
LOC103475798
Lysine (K)-specific demethylase 6A, like.
   
 0.486
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.