STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103478462Uncharacterized protein. (2194 aa)    
Predicted Functional Partners:
LOC103477956
INO80 complex subunit E.
  
  0.504
jcad
Junctional cadherin 5 associated a.
  
     0.502
LOC103467250
MBD domain-containing protein.
  
     0.479
golgb1
Golgin B1.
  
 
  0.475
ENSPREP00000002996
Si:dkey-25o16.4.
  
 
  0.472
LOC103465799
DUF3715 domain-containing protein.
  
     0.458
ENSPREP00000007673
ASD1 domain-containing protein.
  
     0.450
sall2
Si:ch211-212k18.5.
  
 
  0.434
ENSPREP00000029470
Uncharacterized protein.
  
     0.429
insyn2b
Uncharacterized protein.
  
  0.428
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.