STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
irf2bp2Interferon regulatory factor 2 binding protein 2. (512 aa)    
Predicted Functional Partners:
LOC103473948
Euchromatic histone-lysine N-methyltransferase 1b.
   
 
 0.653
LOC103471006
Interferon regulatory factor 2.
   
 
 0.575
pds5b
PDS5 cohesin associated factor B.
   
  
 0.567
LOC103460975
Vestigial-like family member 4b.
    
 
 0.566
LOC103467754
Tyrosine-protein phosphatase non-receptor type.
   
  
 0.555
itm2b
Integral membrane protein 2Bb.
      
 0.534
copa
Coatomer subunit alpha; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network.
      
 0.532
ENSPREP00000017890
Uncharacterized protein.
      
 0.526
LOC103475007
Lysophosphatidic acid receptor 6a; Belongs to the G-protein coupled receptor 1 family.
      
 0.513
cdk8
Cyclin-dependent kinase 8; Belongs to the protein kinase superfamily.
      
 0.513
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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