STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rsph3Radial spoke head 3. (320 aa)    
Predicted Functional Partners:
nanp
N-acetylneuraminic acid phosphatase.
   
 
 0.939
wtap
WT1 associated protein.
    
   0.937
ing3
Inhibitor of growth protein.
    
   0.937
ppp1r21
Protein phosphatase 1, regulatory subunit 21.
    
   0.937
LOC103464219
Radial spoke head component 4A.
  
 
 0.865
ENSPREP00000013027
Dystrobrevin, alpha.
    
   0.813
dtnb
Dystrobrevin.
    
   0.813
LOC103457276
Dystrobrevin.
    
   0.813
rsph9
Radial spoke head 9 homolog.
  
 
 0.790
rsph1
Uncharacterized protein.
   
 
 0.703
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.