STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103480308NDRG family member 2. (387 aa)    
Predicted Functional Partners:
VDAC2
Voltage dependent anion channel 2.
   
  
 0.481
LOC103465691
Creatine kinase, mitochondrial 1; Belongs to the ATP:guanido phosphotransferase family.
   
  
 0.481
LOC103476817
Voltage-dependent anion channel 2.
   
  
 0.481
slit1
Slit homolog 1a (Drosophila).
      
 0.475
hspb6
Heat shock protein, alpha-crystallin-related, b6; Belongs to the small heat shock protein (HSP20) family.
      
 0.473
LOC103465887
Uncharacterized protein.
      
 0.473
cables1
Cdk5 and Abl enzyme substrate 1.
      
 0.472
fam162a
Family with sequence similarity 162 member A.
      
 0.436
ADAM11
ADAM metallopeptidase domain 11.
   
  
 0.403
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.