STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000011948Ankyrin repeat and SOCS box containing 10. (315 aa)    
Predicted Functional Partners:
ift81
Intraflagellar transport 81 homolog.
    
 0.493
ift88
Intraflagellar transport 88 homolog.
   
 0.466
ift52
Intraflagellar transport 52 homolog (Chlamydomonas).
    
 0.460
ift22
Intraflagellar transport 22 homolog (Chlamydomonas).
    
 0.459
wdr36
WD repeat domain 36.
   
  
 0.453
commd8
COMM domain containing 8.
   
  0.438
LOC103469085
Fleer.
    
 0.435
ift57
Intraflagellar transport 57 homolog (Chlamydomonas).
    
 0.430
lrrc20
Leucine rich repeat containing 20.
   
 0.425
LOC103475981
Ubiquitin-like domain-containing protein.
    
  0.425
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.