STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mfsd10Major facilitator superfamily domain containing 10. (450 aa)    
Predicted Functional Partners:
LOC103473716
Glycerol-3-phosphate acyltransferase 4.
 
 
    0.645
mfsd12
Major facilitator superfamily domain containing 12a.
      
 0.642
mfsd6
Major facilitator superfamily domain containing 6a.
      
 0.629
mfsd9
Major facilitator superfamily domain containing 9.
  
   
0.603
slc46a2
Solute carrier family 46 member 2.
   
  
 0.569
svopl
SVOP-like.
   
  
 0.566
LOC103470001
1-acylglycerol-3-phosphate O-acyltransferase 9, like.
 
 
    0.550
mpg
N-methylpurine DNA glycosylase.
      
 0.549
unc93a
Unc-93 homolog A.
      
 0.549
mfsd13a
Major facilitator superfamily domain containing 13A.
      
 0.546
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.