STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCNN1Potassium calcium-activated channel subfamily N member 1. (907 aa)    
Predicted Functional Partners:
unc13a
Uncharacterized protein.
   
  
 0.648
LOC103479452
Unc-13 homolog A.
   
  
 0.648
TNPO2
Transportin 2.
      
 0.644
TNPO2-2
Transportin 2.
      
 0.644
LOC103463799
Solute carrier family 35 member D1a.
   
  
 0.644
nxnl1
Nucleoredoxin like 1.
   
  
 0.642
mast3
Microtubule associated serine/threonine kinase 3b.
      
 0.640
LOC103463355
TFIIS N-terminal domain-containing protein.
      
 0.640
LOC103468255
IlGF domain-containing protein.
      
 0.566
asf1b
Anti-silencing function 1Ba histone chaperone.
      
 0.560
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.