STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103472993Mab-21 domain-containing protein. (469 aa)    
Predicted Functional Partners:
LOC103476464
Cyclic GMP-AMP synthase.
  
  
 
0.907
LOC103475016
Thyroid hormone responsive.
    
  0.508
LOC103481249
Interferon regulatory factor 3.
      
 0.471
phf11
PHD-type domain-containing protein.
      
 0.469
ifi35
Interferon-induced protein 35.
      
 0.469
tbk1
TANK-binding kinase 1.
      
 0.440
sting1
Transmembrane protein 173.
    
 0.427
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.