STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103466968Homeobox domain-containing protein. (369 aa)    
Predicted Functional Partners:
ENSPREP00000025214
Paired domain-containing protein.
 
  
 
 0.767
TIMM22
Translocase of inner mitochondrial membrane 22.
    
 0.746
pax9
Paired box 9.
 
    
 0.738
timm10
Translocase of inner mitochondrial membrane 10 homolog (yeast).
   
 0.640
timm9
Translocase of inner mitochondrial membrane 9 homolog.
   
 
 0.634
sdhd
Succinate dehydrogenase [ubiquinone] cytochrome b small subunit; Membrane-anchoring subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q); Belongs to the CybS family.
    
 0.573
LOC103479278
Cactin.
    
 0.530
LOC103479458
Uncharacterized protein.
    
 0.530
pax1
Paired box 1a.
 
    
 0.470
myog
Myogenin.
   
 
 0.460
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.