Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ENSPREP00000026406 | rnf8 | ENSPREP00000026406 | ENSPREP00000012303 | Oxoglutarate dehydrogenase. | E3 ubiquitin-protein ligase RNF8; E3 ubiquitin-protein ligase that plays a key role in DNA damage signaling via 2 distinct roles: by mediating the 'Lys-63'-linked ubiquitination of histones H2A and H2AX and promoting the recruitment of DNA repair proteins at double-strand breaks (DSBs) sites, and by catalyzing 'Lys-48'-linked ubiquitination to remove target proteins from DNA damage sites. Following DNA DSBs, it is recruited to the sites of damage by ATM-phosphorylated MDC1 and catalyzes the 'Lys-63'-linked ubiquitination of histones H2A and H2AX, thereby promoting the formation of TP53 [...] | 0.924 |
| LOC103466094 | LOC103473189 | ENSPREP00000026505 | ENSPREP00000021152 | Ubiquitin conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family. | Uncharacterized protein. | 0.917 |
| LOC103466094 | mdc1 | ENSPREP00000026505 | ENSPREP00000019394 | Ubiquitin conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family. | Uncharacterized protein. | 0.595 |
| LOC103466094 | rnf8 | ENSPREP00000026505 | ENSPREP00000012303 | Ubiquitin conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family. | E3 ubiquitin-protein ligase RNF8; E3 ubiquitin-protein ligase that plays a key role in DNA damage signaling via 2 distinct roles: by mediating the 'Lys-63'-linked ubiquitination of histones H2A and H2AX and promoting the recruitment of DNA repair proteins at double-strand breaks (DSBs) sites, and by catalyzing 'Lys-48'-linked ubiquitination to remove target proteins from DNA damage sites. Following DNA DSBs, it is recruited to the sites of damage by ATM-phosphorylated MDC1 and catalyzes the 'Lys-63'-linked ubiquitination of histones H2A and H2AX, thereby promoting the formation of TP53 [...] | 0.947 |
| LOC103466094 | rps27a | ENSPREP00000026505 | ENSPREP00000018427 | Ubiquitin conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family. | Ribosomal protein S27a. | 0.968 |
| LOC103466094 | tp53bp1 | ENSPREP00000026505 | ENSPREP00000025854 | Ubiquitin conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family. | Tumor protein p53 binding protein, 1. | 0.744 |
| LOC103466094 | uba52 | ENSPREP00000026505 | ENSPREP00000016516 | Ubiquitin conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family. | Ubiquitin A-52 residue ribosomal protein fusion product 1. | 0.963 |
| LOC103466094 | ubb | ENSPREP00000026505 | ENSPREP00000009876 | Ubiquitin conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family. | Uncharacterized protein. | 0.917 |
| LOC103466094 | ube2n | ENSPREP00000026505 | ENSPREP00000017852 | Ubiquitin conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family. | UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. | 0.900 |
| LOC103473189 | LOC103466094 | ENSPREP00000021152 | ENSPREP00000026505 | Uncharacterized protein. | Ubiquitin conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family. | 0.917 |
| LOC103473189 | rnf8 | ENSPREP00000021152 | ENSPREP00000012303 | Uncharacterized protein. | E3 ubiquitin-protein ligase RNF8; E3 ubiquitin-protein ligase that plays a key role in DNA damage signaling via 2 distinct roles: by mediating the 'Lys-63'-linked ubiquitination of histones H2A and H2AX and promoting the recruitment of DNA repair proteins at double-strand breaks (DSBs) sites, and by catalyzing 'Lys-48'-linked ubiquitination to remove target proteins from DNA damage sites. Following DNA DSBs, it is recruited to the sites of damage by ATM-phosphorylated MDC1 and catalyzes the 'Lys-63'-linked ubiquitination of histones H2A and H2AX, thereby promoting the formation of TP53 [...] | 0.884 |
| LOC103473189 | rps27a | ENSPREP00000021152 | ENSPREP00000018427 | Uncharacterized protein. | Ribosomal protein S27a. | 0.953 |
| LOC103473189 | tp53bp1 | ENSPREP00000021152 | ENSPREP00000025854 | Uncharacterized protein. | Tumor protein p53 binding protein, 1. | 0.795 |
| LOC103473189 | uba52 | ENSPREP00000021152 | ENSPREP00000016516 | Uncharacterized protein. | Ubiquitin A-52 residue ribosomal protein fusion product 1. | 0.972 |
| LOC103473189 | ube2n | ENSPREP00000021152 | ENSPREP00000017852 | Uncharacterized protein. | UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. | 0.917 |
| mdc1 | LOC103466094 | ENSPREP00000019394 | ENSPREP00000026505 | Uncharacterized protein. | Ubiquitin conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family. | 0.595 |
| mdc1 | rnf8 | ENSPREP00000019394 | ENSPREP00000012303 | Uncharacterized protein. | E3 ubiquitin-protein ligase RNF8; E3 ubiquitin-protein ligase that plays a key role in DNA damage signaling via 2 distinct roles: by mediating the 'Lys-63'-linked ubiquitination of histones H2A and H2AX and promoting the recruitment of DNA repair proteins at double-strand breaks (DSBs) sites, and by catalyzing 'Lys-48'-linked ubiquitination to remove target proteins from DNA damage sites. Following DNA DSBs, it is recruited to the sites of damage by ATM-phosphorylated MDC1 and catalyzes the 'Lys-63'-linked ubiquitination of histones H2A and H2AX, thereby promoting the formation of TP53 [...] | 0.873 |
| mdc1 | rps27a | ENSPREP00000019394 | ENSPREP00000018427 | Uncharacterized protein. | Ribosomal protein S27a. | 0.423 |
| mdc1 | tp53bp1 | ENSPREP00000019394 | ENSPREP00000025854 | Uncharacterized protein. | Tumor protein p53 binding protein, 1. | 0.955 |
| mdc1 | ube2n | ENSPREP00000019394 | ENSPREP00000017852 | Uncharacterized protein. | UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. | 0.595 |
page 1 of 4